import org.apache.xmlbeans.*;\r
\r
public class MsaWriter {\r
- MsaWriter(String path, ModuleInfo moduleinfo, Database database) {\r
+ MsaWriter(String path, ModuleInfo moduleinfo, Database database, UI u) {\r
modulepath = path;\r
mi = moduleinfo;\r
db = database;\r
+ ui = u;\r
}\r
\r
private String modulepath;\r
private ModuleInfo mi;\r
private Database db;\r
+ private UI ui;\r
\r
private ModuleSurfaceAreaDocument msadoc = ModuleSurfaceAreaDocument.Factory.newInstance();\r
\r
\r
BufferedWriter bw = new BufferedWriter(new FileWriter(modulepath + File.separator + "result" + File.separator + mi.modulename + ".msa"));\r
fulfillMsadoc().save(bw, options);\r
+ //MsaTreeEditor.init(mi, ui, msadoc);\r
bw.flush();\r
bw.close();\r
}\r