BaseTools: fix --genfds-multi-thread generate makefile issue

BaseTools: fix --genfds-multi-thread generate makefile issue

1. when inf file is binary module, not generate makefile,
  so need generate ffs with previous method.
2. generate Ui section maybe override and the string is not
  $(MODULE_NAME)
  like as:
  INF  RuleOverride = UI MdeModulePkg/Application/UiApp/UiApp.inf
3. Trim generate incorrect Offset.raw when some vfr not generate .lst
   file in Debug directory, Trim get the VFR name with the .c files
   replacement.
4. fix some depex file not generate issue

Cc: Liming Gao <liming.gao@intel.com>
Cc: Yonghong Zhu <yonghong.zhu@intel.com>
Contributed-under: TianoCore Contribution Agreement 1.1
Signed-off-by: Yunhua Feng <yunhuax.feng@intel.com>
Reviewed-by: Yonghong Zhu <yonghong.zhu@intel.com>