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24 | </div> | |
25 | <div class="section"> | |
26 | <div class="titlepage"><div><div><h4 class="title"> | |
27 | <a name="math_toolkit.dist_ref.dists.geometric_dist"></a><a class="link" href="geometric_dist.html" title="Geometric Distribution">Geometric | |
28 | Distribution</a> | |
29 | </h4></div></div></div> | |
30 | <pre class="programlisting"><span class="preprocessor">#include</span> <span class="special"><</span><span class="identifier">boost</span><span class="special">/</span><span class="identifier">math</span><span class="special">/</span><span class="identifier">distributions</span><span class="special">/</span><span class="identifier">geometric</span><span class="special">.</span><span class="identifier">hpp</span><span class="special">></span></pre> | |
31 | <pre class="programlisting"><span class="keyword">namespace</span> <span class="identifier">boost</span><span class="special">{</span> <span class="keyword">namespace</span> <span class="identifier">math</span><span class="special">{</span> | |
32 | ||
33 | <span class="keyword">template</span> <span class="special"><</span><span class="keyword">class</span> <span class="identifier">RealType</span> <span class="special">=</span> <span class="keyword">double</span><span class="special">,</span> | |
34 | <span class="keyword">class</span> <a class="link" href="../../../policy.html" title="Chapter 15. Policies: Controlling Precision, Error Handling etc">Policy</a> <span class="special">=</span> <a class="link" href="../../pol_ref/pol_ref_ref.html" title="Policy Class Reference">policies::policy<></a> <span class="special">></span> | |
35 | <span class="keyword">class</span> <span class="identifier">geometric_distribution</span><span class="special">;</span> | |
36 | ||
37 | <span class="keyword">typedef</span> <span class="identifier">geometric_distribution</span><span class="special"><></span> <span class="identifier">geometric</span><span class="special">;</span> | |
38 | ||
39 | <span class="keyword">template</span> <span class="special"><</span><span class="keyword">class</span> <span class="identifier">RealType</span><span class="special">,</span> <span class="keyword">class</span> <a class="link" href="../../../policy.html" title="Chapter 15. Policies: Controlling Precision, Error Handling etc">Policy</a><span class="special">></span> | |
40 | <span class="keyword">class</span> <span class="identifier">geometric_distribution</span> | |
41 | <span class="special">{</span> | |
42 | <span class="keyword">public</span><span class="special">:</span> | |
43 | <span class="keyword">typedef</span> <span class="identifier">RealType</span> <span class="identifier">value_type</span><span class="special">;</span> | |
44 | <span class="keyword">typedef</span> <span class="identifier">Policy</span> <span class="identifier">policy_type</span><span class="special">;</span> | |
45 | <span class="comment">// Constructor from success_fraction:</span> | |
46 | <span class="identifier">geometric_distribution</span><span class="special">(</span><span class="identifier">RealType</span> <span class="identifier">p</span><span class="special">);</span> | |
47 | ||
48 | <span class="comment">// Parameter accessors:</span> | |
49 | <span class="identifier">RealType</span> <span class="identifier">success_fraction</span><span class="special">()</span> <span class="keyword">const</span><span class="special">;</span> | |
50 | <span class="identifier">RealType</span> <span class="identifier">successes</span><span class="special">()</span> <span class="keyword">const</span><span class="special">;</span> | |
51 | ||
52 | <span class="comment">// Bounds on success fraction:</span> | |
53 | <span class="keyword">static</span> <span class="identifier">RealType</span> <span class="identifier">find_lower_bound_on_p</span><span class="special">(</span> | |
54 | <span class="identifier">RealType</span> <span class="identifier">trials</span><span class="special">,</span> | |
55 | <span class="identifier">RealType</span> <span class="identifier">successes</span><span class="special">,</span> | |
56 | <span class="identifier">RealType</span> <span class="identifier">probability</span><span class="special">);</span> <span class="comment">// alpha</span> | |
57 | <span class="keyword">static</span> <span class="identifier">RealType</span> <span class="identifier">find_upper_bound_on_p</span><span class="special">(</span> | |
58 | <span class="identifier">RealType</span> <span class="identifier">trials</span><span class="special">,</span> | |
59 | <span class="identifier">RealType</span> <span class="identifier">successes</span><span class="special">,</span> | |
60 | <span class="identifier">RealType</span> <span class="identifier">probability</span><span class="special">);</span> <span class="comment">// alpha</span> | |
61 | ||
62 | <span class="comment">// Estimate min/max number of trials:</span> | |
63 | <span class="keyword">static</span> <span class="identifier">RealType</span> <span class="identifier">find_minimum_number_of_trials</span><span class="special">(</span> | |
64 | <span class="identifier">RealType</span> <span class="identifier">k</span><span class="special">,</span> <span class="comment">// Number of failures.</span> | |
65 | <span class="identifier">RealType</span> <span class="identifier">p</span><span class="special">,</span> <span class="comment">// Success fraction.</span> | |
66 | <span class="identifier">RealType</span> <span class="identifier">probability</span><span class="special">);</span> <span class="comment">// Probability threshold alpha.</span> | |
67 | <span class="keyword">static</span> <span class="identifier">RealType</span> <span class="identifier">find_maximum_number_of_trials</span><span class="special">(</span> | |
68 | <span class="identifier">RealType</span> <span class="identifier">k</span><span class="special">,</span> <span class="comment">// Number of failures.</span> | |
69 | <span class="identifier">RealType</span> <span class="identifier">p</span><span class="special">,</span> <span class="comment">// Success fraction.</span> | |
70 | <span class="identifier">RealType</span> <span class="identifier">probability</span><span class="special">);</span> <span class="comment">// Probability threshold alpha.</span> | |
71 | <span class="special">};</span> | |
72 | ||
73 | <span class="special">}}</span> <span class="comment">// namespaces</span> | |
74 | </pre> | |
75 | <p> | |
76 | The class type <code class="computeroutput"><span class="identifier">geometric_distribution</span></code> | |
77 | represents a <a href="http://en.wikipedia.org/wiki/geometric_distribution" target="_top">geometric | |
78 | distribution</a>: it is used when there are exactly two mutually exclusive | |
79 | outcomes of a <a href="http://en.wikipedia.org/wiki/Bernoulli_trial" target="_top">Bernoulli | |
80 | trial</a>: these outcomes are labelled "success" and "failure". | |
81 | </p> | |
82 | <p> | |
83 | For <a href="http://en.wikipedia.org/wiki/Bernoulli_trial" target="_top">Bernoulli | |
84 | trials</a> each with success fraction <span class="emphasis"><em>p</em></span>, the geometric | |
85 | distribution gives the probability of observing <span class="emphasis"><em>k</em></span> | |
86 | trials (failures, events, occurrences, or arrivals) before the first success. | |
87 | </p> | |
88 | <div class="note"><table border="0" summary="Note"> | |
89 | <tr> | |
90 | <td rowspan="2" align="center" valign="top" width="25"><img alt="[Note]" src="../../../../../../../doc/src/images/note.png"></td> | |
91 | <th align="left">Note</th> | |
92 | </tr> | |
93 | <tr><td align="left" valign="top"><p> | |
94 | For this implementation, the set of trials <span class="bold"><strong>includes | |
95 | zero</strong></span> (unlike another definition where the set of trials starts | |
96 | at one, sometimes named <span class="emphasis"><em>shifted</em></span>). | |
97 | </p></td></tr> | |
98 | </table></div> | |
99 | <p> | |
100 | The geometric distribution assumes that success_fraction <span class="emphasis"><em>p</em></span> | |
101 | is fixed for all <span class="emphasis"><em>k</em></span> trials. | |
102 | </p> | |
103 | <p> | |
104 | The probability that there are <span class="emphasis"><em>k</em></span> failures before the | |
105 | first success is | |
106 | </p> | |
107 | <p> | |
108 |    Pr(Y=<span class="emphasis"><em>k</em></span>) = (1-<span class="emphasis"><em>p</em></span>)<sup><span class="emphasis"><em>k</em></span></sup><span class="emphasis"><em>p</em></span> | |
109 | </p> | |
110 | <p> | |
111 | For example, when throwing a 6-face dice the success probability <span class="emphasis"><em>p</em></span> | |
112 | = 1/6 = 0.1666 ̇  . Throwing repeatedly until a <span class="emphasis"><em>three</em></span> | |
113 | appears, the probability distribution of the number of times <span class="emphasis"><em>not-a-three</em></span> | |
114 | is thrown is geometric. | |
115 | </p> | |
116 | <p> | |
117 | Geometric distribution has the Probability Density Function PDF: | |
118 | </p> | |
119 | <p> | |
120 |    (1-<span class="emphasis"><em>p</em></span>)<sup><span class="emphasis"><em>k</em></span></sup><span class="emphasis"><em>p</em></span> | |
121 | </p> | |
122 | <p> | |
123 | The following graph illustrates how the PDF and CDF vary for three examples | |
124 | of the success fraction <span class="emphasis"><em>p</em></span>, (when considering the geometric | |
125 | distribution as a continuous function), | |
126 | </p> | |
127 | <p> | |
128 | <span class="inlinemediaobject"><img src="../../../../graphs/geometric_pdf_2.svg" align="middle"></span> | |
129 | </p> | |
130 | <p> | |
131 | <span class="inlinemediaobject"><img src="../../../../graphs/geometric_cdf_2.svg" align="middle"></span> | |
132 | </p> | |
133 | <p> | |
134 | and as discrete. | |
135 | </p> | |
136 | <p> | |
137 | <span class="inlinemediaobject"><img src="../../../../graphs/geometric_pdf_discrete.svg" align="middle"></span> | |
138 | </p> | |
139 | <p> | |
140 | <span class="inlinemediaobject"><img src="../../../../graphs/geometric_cdf_discrete.svg" align="middle"></span> | |
141 | </p> | |
142 | <h5> | |
143 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h0"></a> | |
144 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.related_distributions"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.related_distributions">Related | |
145 | Distributions</a> | |
146 | </h5> | |
147 | <p> | |
148 | The geometric distribution is a special case of the <a class="link" href="negative_binomial_dist.html" title="Negative Binomial Distribution">Negative | |
149 | Binomial Distribution</a> with successes parameter <span class="emphasis"><em>r</em></span> | |
150 | = 1, so only one first and only success is required : thus by definition | |
151 |    <code class="computeroutput"><span class="identifier">geometric</span><span class="special">(</span><span class="identifier">p</span><span class="special">)</span> <span class="special">==</span> | |
152 | <span class="identifier">negative_binomial</span><span class="special">(</span><span class="number">1</span><span class="special">,</span> <span class="identifier">p</span><span class="special">)</span></code> | |
153 | </p> | |
154 | <pre class="programlisting"><span class="identifier">negative_binomial_distribution</span><span class="special">(</span><span class="identifier">RealType</span> <span class="identifier">r</span><span class="special">,</span> <span class="identifier">RealType</span> <span class="identifier">success_fraction</span><span class="special">);</span> | |
155 | <span class="identifier">negative_binomial</span> <span class="identifier">nb</span><span class="special">(</span><span class="number">1</span><span class="special">,</span> <span class="identifier">success_fraction</span><span class="special">);</span> | |
156 | <span class="identifier">geometric</span> <span class="identifier">g</span><span class="special">(</span><span class="identifier">success_fraction</span><span class="special">);</span> | |
157 | <span class="identifier">ASSERT</span><span class="special">(</span><span class="identifier">pdf</span><span class="special">(</span><span class="identifier">nb</span><span class="special">,</span> <span class="number">1</span><span class="special">)</span> <span class="special">==</span> <span class="identifier">pdf</span><span class="special">(</span><span class="identifier">g</span><span class="special">,</span> <span class="number">1</span><span class="special">));</span> | |
158 | </pre> | |
159 | <p> | |
160 | This implementation uses real numbers for the computation throughout (because | |
161 | it uses the <span class="bold"><strong>real-valued</strong></span> power and exponential | |
162 | functions). So to obtain a conventional strictly-discrete geometric distribution | |
163 | you must ensure that an integer value is provided for the number of trials | |
164 | (random variable) <span class="emphasis"><em>k</em></span>, and take integer values (floor | |
165 | or ceil functions) from functions that return a number of successes. | |
166 | </p> | |
167 | <div class="caution"><table border="0" summary="Caution"> | |
168 | <tr> | |
169 | <td rowspan="2" align="center" valign="top" width="25"><img alt="[Caution]" src="../../../../../../../doc/src/images/caution.png"></td> | |
170 | <th align="left">Caution</th> | |
171 | </tr> | |
172 | <tr><td align="left" valign="top"> | |
173 | <p> | |
174 | The geometric distribution is a discrete distribution: internally, functions | |
175 | like the <code class="computeroutput"><span class="identifier">cdf</span></code> and <code class="computeroutput"><span class="identifier">pdf</span></code> are treated "as if" they | |
176 | are continuous functions, but in reality the results returned from these | |
177 | functions only have meaning if an integer value is provided for the random | |
178 | variate argument. | |
179 | </p> | |
180 | <p> | |
181 | The quantile function will by default return an integer result that has | |
182 | been <span class="emphasis"><em>rounded outwards</em></span>. That is to say lower quantiles | |
183 | (where the probability is less than 0.5) are rounded downward, and upper | |
184 | quantiles (where the probability is greater than 0.5) are rounded upwards. | |
185 | This behaviour ensures that if an X% quantile is requested, then <span class="emphasis"><em>at | |
186 | least</em></span> the requested coverage will be present in the central | |
187 | region, and <span class="emphasis"><em>no more than</em></span> the requested coverage | |
188 | will be present in the tails. | |
189 | </p> | |
190 | <p> | |
191 | This behaviour can be changed so that the quantile functions are rounded | |
192 | differently, or even return a real-valued result using <a class="link" href="../../pol_overview.html" title="Policy Overview">Policies</a>. | |
193 | It is strongly recommended that you read the tutorial <a class="link" href="../../pol_tutorial/understand_dis_quant.html" title="Understanding Quantiles of Discrete Distributions">Understanding | |
194 | Quantiles of Discrete Distributions</a> before using the quantile | |
195 | function on the geometric distribution. The <a class="link" href="../../pol_ref/discrete_quant_ref.html" title="Discrete Quantile Policies">reference | |
196 | docs</a> describe how to change the rounding policy for these distributions. | |
197 | </p> | |
198 | </td></tr> | |
199 | </table></div> | |
200 | <h5> | |
201 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h1"></a> | |
202 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.member_functions"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.member_functions">Member | |
203 | Functions</a> | |
204 | </h5> | |
205 | <h6> | |
206 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h2"></a> | |
207 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.constructor"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.constructor">Constructor</a> | |
208 | </h6> | |
209 | <pre class="programlisting"><span class="identifier">geometric_distribution</span><span class="special">(</span><span class="identifier">RealType</span> <span class="identifier">p</span><span class="special">);</span> | |
210 | </pre> | |
211 | <p> | |
212 | Constructor: <span class="emphasis"><em>p</em></span> or success_fraction is the probability | |
213 | of success of a single trial. | |
214 | </p> | |
215 | <p> | |
216 | Requires: <code class="computeroutput"><span class="number">0</span> <span class="special"><=</span> | |
217 | <span class="identifier">p</span> <span class="special"><=</span> | |
218 | <span class="number">1</span></code>. | |
219 | </p> | |
220 | <h6> | |
221 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h3"></a> | |
222 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.accessors"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.accessors">Accessors</a> | |
223 | </h6> | |
224 | <pre class="programlisting"><span class="identifier">RealType</span> <span class="identifier">success_fraction</span><span class="special">()</span> <span class="keyword">const</span><span class="special">;</span> <span class="comment">// successes / trials (0 <= p <= 1)</span> | |
225 | </pre> | |
226 | <p> | |
227 | Returns the success_fraction parameter <span class="emphasis"><em>p</em></span> from which | |
228 | this distribution was constructed. | |
229 | </p> | |
230 | <pre class="programlisting"><span class="identifier">RealType</span> <span class="identifier">successes</span><span class="special">()</span> <span class="keyword">const</span><span class="special">;</span> <span class="comment">// required successes always one,</span> | |
231 | <span class="comment">// included for compatibility with negative binomial distribution</span> | |
232 | <span class="comment">// with successes r == 1.</span> | |
233 | </pre> | |
234 | <p> | |
235 | Returns unity. | |
236 | </p> | |
237 | <p> | |
238 | The following functions are equivalent to those provided for the negative | |
239 | binomial, with successes = 1, but are provided here for completeness. | |
240 | </p> | |
241 | <p> | |
242 | The best method of calculation for the following functions is disputed: | |
243 | see <a class="link" href="binomial_dist.html" title="Binomial Distribution">Binomial | |
244 | Distribution</a> and <a class="link" href="negative_binomial_dist.html" title="Negative Binomial Distribution">Negative | |
245 | Binomial Distribution</a> for more discussion. | |
246 | </p> | |
247 | <h6> | |
248 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h4"></a> | |
249 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.lower_bound_on_success_fraction_"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.lower_bound_on_success_fraction_">Lower | |
250 | Bound on success_fraction Parameter <span class="emphasis"><em>p</em></span></a> | |
251 | </h6> | |
252 | <pre class="programlisting"><span class="keyword">static</span> <span class="identifier">RealType</span> <span class="identifier">find_lower_bound_on_p</span><span class="special">(</span> | |
253 | <span class="identifier">RealType</span> <span class="identifier">failures</span><span class="special">,</span> | |
254 | <span class="identifier">RealType</span> <span class="identifier">probability</span><span class="special">)</span> <span class="comment">// (0 <= alpha <= 1), 0.05 equivalent to 95% confidence.</span> | |
255 | </pre> | |
256 | <p> | |
257 | Returns a <span class="bold"><strong>lower bound</strong></span> on the success fraction: | |
258 | </p> | |
259 | <div class="variablelist"> | |
260 | <p class="title"><b></b></p> | |
261 | <dl class="variablelist"> | |
262 | <dt><span class="term">failures</span></dt> | |
263 | <dd><p> | |
264 | The total number of failures before the 1st success. | |
265 | </p></dd> | |
266 | <dt><span class="term">alpha</span></dt> | |
267 | <dd><p> | |
268 | The largest acceptable probability that the true value of the success | |
269 | fraction is <span class="bold"><strong>less than</strong></span> the value | |
270 | returned. | |
271 | </p></dd> | |
272 | </dl> | |
273 | </div> | |
274 | <p> | |
275 | For example, if you observe <span class="emphasis"><em>k</em></span> failures from <span class="emphasis"><em>n</em></span> | |
276 | trials the best estimate for the success fraction is simply 1/<span class="emphasis"><em>n</em></span>, | |
277 | but if you want to be 95% sure that the true value is <span class="bold"><strong>greater | |
278 | than</strong></span> some value, <span class="emphasis"><em>p<sub>min</sub></em></span>, then: | |
279 | </p> | |
280 | <pre class="programlisting"><span class="identifier">p</span><sub>min</sub> <span class="special">=</span> <span class="identifier">geometric_distribution</span><span class="special"><</span><span class="identifier">RealType</span><span class="special">>::</span> | |
281 | <span class="identifier">find_lower_bound_on_p</span><span class="special">(</span><span class="identifier">failures</span><span class="special">,</span> <span class="number">0.05</span><span class="special">);</span> | |
282 | </pre> | |
283 | <p> | |
284 | <a class="link" href="../../stat_tut/weg/neg_binom_eg/neg_binom_conf.html" title="Calculating Confidence Limits on the Frequency of Occurrence for the Negative Binomial Distribution">See | |
285 | negative_binomial confidence interval example.</a> | |
286 | </p> | |
287 | <p> | |
288 | This function uses the Clopper-Pearson method of computing the lower bound | |
289 | on the success fraction, whilst many texts refer to this method as giving | |
290 | an "exact" result in practice it produces an interval that guarantees | |
291 | <span class="emphasis"><em>at least</em></span> the coverage required, and may produce pessimistic | |
292 | estimates for some combinations of <span class="emphasis"><em>failures</em></span> and <span class="emphasis"><em>successes</em></span>. | |
293 | See: | |
294 | </p> | |
295 | <p> | |
296 | <a href="http://www.ucs.louisiana.edu/~kxk4695/Discrete_new.pdf" target="_top">Yong | |
297 | Cai and K. Krishnamoorthy, A Simple Improved Inferential Method for Some | |
298 | Discrete Distributions. Computational statistics and data analysis, 2005, | |
299 | vol. 48, no3, 605-621</a>. | |
300 | </p> | |
301 | <h6> | |
302 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h5"></a> | |
303 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.upper_bound_on_success_fraction_"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.upper_bound_on_success_fraction_">Upper | |
304 | Bound on success_fraction Parameter p</a> | |
305 | </h6> | |
306 | <pre class="programlisting"><span class="keyword">static</span> <span class="identifier">RealType</span> <span class="identifier">find_upper_bound_on_p</span><span class="special">(</span> | |
307 | <span class="identifier">RealType</span> <span class="identifier">trials</span><span class="special">,</span> | |
308 | <span class="identifier">RealType</span> <span class="identifier">alpha</span><span class="special">);</span> <span class="comment">// (0 <= alpha <= 1), 0.05 equivalent to 95% confidence.</span> | |
309 | </pre> | |
310 | <p> | |
311 | Returns an <span class="bold"><strong>upper bound</strong></span> on the success | |
312 | fraction: | |
313 | </p> | |
314 | <div class="variablelist"> | |
315 | <p class="title"><b></b></p> | |
316 | <dl class="variablelist"> | |
317 | <dt><span class="term">trials</span></dt> | |
318 | <dd><p> | |
319 | The total number of trials conducted. | |
320 | </p></dd> | |
321 | <dt><span class="term">alpha</span></dt> | |
322 | <dd><p> | |
323 | The largest acceptable probability that the true value of the success | |
324 | fraction is <span class="bold"><strong>greater than</strong></span> the value | |
325 | returned. | |
326 | </p></dd> | |
327 | </dl> | |
328 | </div> | |
329 | <p> | |
330 | For example, if you observe <span class="emphasis"><em>k</em></span> successes from <span class="emphasis"><em>n</em></span> | |
331 | trials the best estimate for the success fraction is simply <span class="emphasis"><em>k/n</em></span>, | |
332 | but if you want to be 95% sure that the true value is <span class="bold"><strong>less | |
333 | than</strong></span> some value, <span class="emphasis"><em>p<sub>max</sub></em></span>, then: | |
334 | </p> | |
335 | <pre class="programlisting"><span class="identifier">p</span><sub>max</sub> <span class="special">=</span> <span class="identifier">geometric_distribution</span><span class="special"><</span><span class="identifier">RealType</span><span class="special">>::</span><span class="identifier">find_upper_bound_on_p</span><span class="special">(</span> | |
336 | <span class="identifier">k</span><span class="special">,</span> <span class="number">0.05</span><span class="special">);</span> | |
337 | </pre> | |
338 | <p> | |
339 | <a class="link" href="../../stat_tut/weg/neg_binom_eg/neg_binom_conf.html" title="Calculating Confidence Limits on the Frequency of Occurrence for the Negative Binomial Distribution">See | |
340 | negative binomial confidence interval example.</a> | |
341 | </p> | |
342 | <p> | |
343 | This function uses the Clopper-Pearson method of computing the lower bound | |
344 | on the success fraction, whilst many texts refer to this method as giving | |
345 | an "exact" result in practice it produces an interval that guarantees | |
346 | <span class="emphasis"><em>at least</em></span> the coverage required, and may produce pessimistic | |
347 | estimates for some combinations of <span class="emphasis"><em>failures</em></span> and <span class="emphasis"><em>successes</em></span>. | |
348 | See: | |
349 | </p> | |
350 | <p> | |
351 | <a href="http://www.ucs.louisiana.edu/~kxk4695/Discrete_new.pdf" target="_top">Yong | |
352 | Cai and K. Krishnamoorthy, A Simple Improved Inferential Method for Some | |
353 | Discrete Distributions. Computational statistics and data analysis, 2005, | |
354 | vol. 48, no3, 605-621</a>. | |
355 | </p> | |
356 | <h6> | |
357 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h6"></a> | |
358 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.estimating_number_of_trials_to_e"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.estimating_number_of_trials_to_e">Estimating | |
359 | Number of Trials to Ensure at Least a Certain Number of Failures</a> | |
360 | </h6> | |
361 | <pre class="programlisting"><span class="keyword">static</span> <span class="identifier">RealType</span> <span class="identifier">find_minimum_number_of_trials</span><span class="special">(</span> | |
362 | <span class="identifier">RealType</span> <span class="identifier">k</span><span class="special">,</span> <span class="comment">// number of failures.</span> | |
363 | <span class="identifier">RealType</span> <span class="identifier">p</span><span class="special">,</span> <span class="comment">// success fraction.</span> | |
364 | <span class="identifier">RealType</span> <span class="identifier">alpha</span><span class="special">);</span> <span class="comment">// probability threshold (0.05 equivalent to 95%).</span> | |
365 | </pre> | |
366 | <p> | |
367 | This functions estimates the number of trials required to achieve a certain | |
368 | probability that <span class="bold"><strong>more than <span class="emphasis"><em>k</em></span> | |
369 | failures will be observed</strong></span>. | |
370 | </p> | |
371 | <div class="variablelist"> | |
372 | <p class="title"><b></b></p> | |
373 | <dl class="variablelist"> | |
374 | <dt><span class="term">k</span></dt> | |
375 | <dd><p> | |
376 | The target number of failures to be observed. | |
377 | </p></dd> | |
378 | <dt><span class="term">p</span></dt> | |
379 | <dd><p> | |
380 | The probability of <span class="emphasis"><em>success</em></span> for each trial. | |
381 | </p></dd> | |
382 | <dt><span class="term">alpha</span></dt> | |
383 | <dd><p> | |
384 | The maximum acceptable <span class="emphasis"><em>risk</em></span> that only <span class="emphasis"><em>k</em></span> | |
385 | failures or fewer will be observed. | |
386 | </p></dd> | |
387 | </dl> | |
388 | </div> | |
389 | <p> | |
390 | For example: | |
391 | </p> | |
392 | <pre class="programlisting"><span class="identifier">geometric_distribution</span><span class="special"><</span><span class="identifier">RealType</span><span class="special">>::</span><span class="identifier">find_minimum_number_of_trials</span><span class="special">(</span><span class="number">10</span><span class="special">,</span> <span class="number">0.5</span><span class="special">,</span> <span class="number">0.05</span><span class="special">);</span> | |
393 | </pre> | |
394 | <p> | |
395 | Returns the smallest number of trials we must conduct to be 95% (1-0.05) | |
396 | sure of seeing 10 failures that occur with frequency one half. | |
397 | </p> | |
398 | <p> | |
399 | <a class="link" href="../../stat_tut/weg/neg_binom_eg/neg_binom_size_eg.html" title="Estimating Sample Sizes for the Negative Binomial.">Worked | |
400 | Example.</a> | |
401 | </p> | |
402 | <p> | |
403 | This function uses numeric inversion of the geometric distribution to obtain | |
404 | the result: another interpretation of the result is that it finds the number | |
405 | of trials (failures) that will lead to an <span class="emphasis"><em>alpha</em></span> probability | |
406 | of observing <span class="emphasis"><em>k</em></span> failures or fewer. | |
407 | </p> | |
408 | <h6> | |
409 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h7"></a> | |
410 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.estimating_number_of_trials_to_0"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.estimating_number_of_trials_to_0">Estimating | |
411 | Number of Trials to Ensure a Maximum Number of Failures or Less</a> | |
412 | </h6> | |
413 | <pre class="programlisting"><span class="keyword">static</span> <span class="identifier">RealType</span> <span class="identifier">find_maximum_number_of_trials</span><span class="special">(</span> | |
414 | <span class="identifier">RealType</span> <span class="identifier">k</span><span class="special">,</span> <span class="comment">// number of failures.</span> | |
415 | <span class="identifier">RealType</span> <span class="identifier">p</span><span class="special">,</span> <span class="comment">// success fraction.</span> | |
416 | <span class="identifier">RealType</span> <span class="identifier">alpha</span><span class="special">);</span> <span class="comment">// probability threshold (0.05 equivalent to 95%).</span> | |
417 | </pre> | |
418 | <p> | |
419 | This functions estimates the maximum number of trials we can conduct and | |
420 | achieve a certain probability that <span class="bold"><strong>k failures or | |
421 | fewer will be observed</strong></span>. | |
422 | </p> | |
423 | <div class="variablelist"> | |
424 | <p class="title"><b></b></p> | |
425 | <dl class="variablelist"> | |
426 | <dt><span class="term">k</span></dt> | |
427 | <dd><p> | |
428 | The maximum number of failures to be observed. | |
429 | </p></dd> | |
430 | <dt><span class="term">p</span></dt> | |
431 | <dd><p> | |
432 | The probability of <span class="emphasis"><em>success</em></span> for each trial. | |
433 | </p></dd> | |
434 | <dt><span class="term">alpha</span></dt> | |
435 | <dd><p> | |
436 | The maximum acceptable <span class="emphasis"><em>risk</em></span> that more than | |
437 | <span class="emphasis"><em>k</em></span> failures will be observed. | |
438 | </p></dd> | |
439 | </dl> | |
440 | </div> | |
441 | <p> | |
442 | For example: | |
443 | </p> | |
444 | <pre class="programlisting"><span class="identifier">geometric_distribution</span><span class="special"><</span><span class="identifier">RealType</span><span class="special">>::</span><span class="identifier">find_maximum_number_of_trials</span><span class="special">(</span><span class="number">0</span><span class="special">,</span> <span class="number">1.0</span><span class="special">-</span><span class="number">1.0</span><span class="special">/</span><span class="number">1000000</span><span class="special">,</span> <span class="number">0.05</span><span class="special">);</span> | |
445 | </pre> | |
446 | <p> | |
447 | Returns the largest number of trials we can conduct and still be 95% sure | |
448 | of seeing no failures that occur with frequency one in one million. | |
449 | </p> | |
450 | <p> | |
451 | This function uses numeric inversion of the geometric distribution to obtain | |
452 | the result: another interpretation of the result, is that it finds the | |
453 | number of trials that will lead to an <span class="emphasis"><em>alpha</em></span> probability | |
454 | of observing more than k failures. | |
455 | </p> | |
456 | <h5> | |
457 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h8"></a> | |
458 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.non_member_accessors"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.non_member_accessors">Non-member | |
459 | Accessors</a> | |
460 | </h5> | |
461 | <p> | |
462 | All the <a class="link" href="../nmp.html" title="Non-Member Properties">usual non-member accessor | |
463 | functions</a> that are generic to all distributions are supported: | |
464 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.cdf">Cumulative Distribution Function</a>, | |
465 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.pdf">Probability Density Function</a>, | |
466 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.quantile">Quantile</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.hazard">Hazard Function</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.chf">Cumulative Hazard Function</a>, | |
467 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.mean">mean</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.median">median</a>, | |
468 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.mode">mode</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.variance">variance</a>, | |
469 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.sd">standard deviation</a>, | |
470 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.skewness">skewness</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.kurtosis">kurtosis</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.kurtosis_excess">kurtosis_excess</a>, | |
471 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.range">range</a> and <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.support">support</a>. | |
472 | </p> | |
473 | <p> | |
474 | However it's worth taking a moment to define what these actually mean in | |
475 | the context of this distribution: | |
476 | </p> | |
477 | <div class="table"> | |
478 | <a name="math_toolkit.dist_ref.dists.geometric_dist.meaning_of_the_non_member_access"></a><p class="title"><b>Table 5.2. Meaning of the non-member accessors.</b></p> | |
479 | <div class="table-contents"><table class="table" summary="Meaning of the non-member accessors."> | |
480 | <colgroup> | |
481 | <col> | |
482 | <col> | |
483 | </colgroup> | |
484 | <thead><tr> | |
485 | <th> | |
486 | <p> | |
487 | Function | |
488 | </p> | |
489 | </th> | |
490 | <th> | |
491 | <p> | |
492 | Meaning | |
493 | </p> | |
494 | </th> | |
495 | </tr></thead> | |
496 | <tbody> | |
497 | <tr> | |
498 | <td> | |
499 | <p> | |
500 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.pdf">Probability Density | |
501 | Function</a> | |
502 | </p> | |
503 | </td> | |
504 | <td> | |
505 | <p> | |
506 | The probability of obtaining <span class="bold"><strong>exactly k | |
507 | failures</strong></span> from <span class="emphasis"><em>k</em></span> trials with success | |
508 | fraction p. For example: | |
509 | </p> | |
510 | <pre class="programlisting"><span class="identifier">pdf</span><span class="special">(</span><span class="identifier">geometric</span><span class="special">(</span><span class="identifier">p</span><span class="special">),</span> <span class="identifier">k</span><span class="special">)</span></pre> | |
511 | </td> | |
512 | </tr> | |
513 | <tr> | |
514 | <td> | |
515 | <p> | |
516 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.cdf">Cumulative Distribution | |
517 | Function</a> | |
518 | </p> | |
519 | </td> | |
520 | <td> | |
521 | <p> | |
522 | The probability of obtaining <span class="bold"><strong>k failures | |
523 | or fewer</strong></span> from <span class="emphasis"><em>k</em></span> trials with success | |
524 | fraction p and success on the last trial. For example: | |
525 | </p> | |
526 | <pre class="programlisting"><span class="identifier">cdf</span><span class="special">(</span><span class="identifier">geometric</span><span class="special">(</span><span class="identifier">p</span><span class="special">),</span> <span class="identifier">k</span><span class="special">)</span></pre> | |
527 | </td> | |
528 | </tr> | |
529 | <tr> | |
530 | <td> | |
531 | <p> | |
532 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.ccdf">Complement of | |
533 | the Cumulative Distribution Function</a> | |
534 | </p> | |
535 | </td> | |
536 | <td> | |
537 | <p> | |
538 | The probability of obtaining <span class="bold"><strong>more than | |
539 | k failures</strong></span> from <span class="emphasis"><em>k</em></span> trials with | |
540 | success fraction p and success on the last trial. For example: | |
541 | </p> | |
542 | <pre class="programlisting"><span class="identifier">cdf</span><span class="special">(</span><span class="identifier">complement</span><span class="special">(</span><span class="identifier">geometric</span><span class="special">(</span><span class="identifier">p</span><span class="special">),</span> <span class="identifier">k</span><span class="special">))</span></pre> | |
543 | </td> | |
544 | </tr> | |
545 | <tr> | |
546 | <td> | |
547 | <p> | |
548 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.quantile">Quantile</a> | |
549 | </p> | |
550 | </td> | |
551 | <td> | |
552 | <p> | |
553 | The <span class="bold"><strong>greatest</strong></span> number of failures | |
554 | <span class="emphasis"><em>k</em></span> expected to be observed from <span class="emphasis"><em>k</em></span> | |
555 | trials with success fraction <span class="emphasis"><em>p</em></span>, at probability | |
556 | <span class="emphasis"><em>P</em></span>. Note that the value returned is a real-number, | |
557 | and not an integer. Depending on the use case you may want to | |
558 | take either the floor or ceiling of the real result. For example: | |
559 | </p> | |
560 | <pre class="programlisting"><span class="identifier">quantile</span><span class="special">(</span><span class="identifier">geometric</span><span class="special">(</span><span class="identifier">p</span><span class="special">),</span> <span class="identifier">P</span><span class="special">)</span></pre> | |
561 | </td> | |
562 | </tr> | |
563 | <tr> | |
564 | <td> | |
565 | <p> | |
566 | <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.quantile_c">Quantile | |
567 | from the complement of the probability</a> | |
568 | </p> | |
569 | </td> | |
570 | <td> | |
571 | <p> | |
572 | The <span class="bold"><strong>smallest</strong></span> number of failures | |
573 | <span class="emphasis"><em>k</em></span> expected to be observed from <span class="emphasis"><em>k</em></span> | |
574 | trials with success fraction <span class="emphasis"><em>p</em></span>, at probability | |
575 | <span class="emphasis"><em>P</em></span>. Note that the value returned is a real-number, | |
576 | and not an integer. Depending on the use case you may want to | |
577 | take either the floor or ceiling of the real result. For example: | |
578 | </p> | |
579 | <pre class="programlisting"><span class="identifier">quantile</span><span class="special">(</span><span class="identifier">complement</span><span class="special">(</span><span class="identifier">geometric</span><span class="special">(</span><span class="identifier">p</span><span class="special">),</span> <span class="identifier">P</span><span class="special">))</span></pre> | |
580 | </td> | |
581 | </tr> | |
582 | </tbody> | |
583 | </table></div> | |
584 | </div> | |
585 | <br class="table-break"><h5> | |
586 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h9"></a> | |
587 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.accuracy"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.accuracy">Accuracy</a> | |
588 | </h5> | |
589 | <p> | |
590 | This distribution is implemented using the pow and exp functions, so most | |
591 | results are accurate within a few epsilon for the RealType. For extreme | |
592 | values of <code class="computeroutput"><span class="keyword">double</span></code> <span class="emphasis"><em>p</em></span>, | |
593 | for example 0.9999999999, accuracy can fall significantly, for example | |
594 | to 10 decimal digits (from 16). | |
595 | </p> | |
596 | <h5> | |
597 | <a name="math_toolkit.dist_ref.dists.geometric_dist.h10"></a> | |
598 | <span class="phrase"><a name="math_toolkit.dist_ref.dists.geometric_dist.implementation"></a></span><a class="link" href="geometric_dist.html#math_toolkit.dist_ref.dists.geometric_dist.implementation">Implementation</a> | |
599 | </h5> | |
600 | <p> | |
601 | In the following table, <span class="emphasis"><em>p</em></span> is the probability that | |
602 | any one trial will be successful (the success fraction), <span class="emphasis"><em>k</em></span> | |
603 | is the number of failures, <span class="emphasis"><em>p</em></span> is the probability and | |
604 | <span class="emphasis"><em>q = 1-p</em></span>, <span class="emphasis"><em>x</em></span> is the given probability | |
605 | to estimate the expected number of failures using the quantile. | |
606 | </p> | |
607 | <div class="informaltable"><table class="table"> | |
608 | <colgroup> | |
609 | <col> | |
610 | <col> | |
611 | </colgroup> | |
612 | <thead><tr> | |
613 | <th> | |
614 | <p> | |
615 | Function | |
616 | </p> | |
617 | </th> | |
618 | <th> | |
619 | <p> | |
620 | Implementation Notes | |
621 | </p> | |
622 | </th> | |
623 | </tr></thead> | |
624 | <tbody> | |
625 | <tr> | |
626 | <td> | |
627 | <p> | |
628 | ||
629 | </p> | |
630 | </td> | |
631 | <td> | |
632 | <p> | |
633 | pdf = p * pow(q, k) | |
634 | </p> | |
635 | </td> | |
636 | </tr> | |
637 | <tr> | |
638 | <td> | |
639 | <p> | |
640 | cdf | |
641 | </p> | |
642 | </td> | |
643 | <td> | |
644 | <p> | |
645 | cdf = 1 - q<sup>k=1</sup> | |
646 | </p> | |
647 | </td> | |
648 | </tr> | |
649 | <tr> | |
650 | <td> | |
651 | <p> | |
652 | cdf complement | |
653 | </p> | |
654 | </td> | |
655 | <td> | |
656 | <p> | |
657 | exp(log1p(-p) * (k+1)) | |
658 | </p> | |
659 | </td> | |
660 | </tr> | |
661 | <tr> | |
662 | <td> | |
663 | <p> | |
664 | quantile | |
665 | </p> | |
666 | </td> | |
667 | <td> | |
668 | <p> | |
669 | k = log1p(-x) / log1p(-p) -1 | |
670 | </p> | |
671 | </td> | |
672 | </tr> | |
673 | <tr> | |
674 | <td> | |
675 | <p> | |
676 | quantile from the complement | |
677 | </p> | |
678 | </td> | |
679 | <td> | |
680 | <p> | |
681 | k = log(x) / log1p(-p) -1 | |
682 | </p> | |
683 | </td> | |
684 | </tr> | |
685 | <tr> | |
686 | <td> | |
687 | <p> | |
688 | mean | |
689 | </p> | |
690 | </td> | |
691 | <td> | |
692 | <p> | |
693 | (1-p)/p | |
694 | </p> | |
695 | </td> | |
696 | </tr> | |
697 | <tr> | |
698 | <td> | |
699 | <p> | |
700 | variance | |
701 | </p> | |
702 | </td> | |
703 | <td> | |
704 | <p> | |
705 | (1-p)/p² | |
706 | </p> | |
707 | </td> | |
708 | </tr> | |
709 | <tr> | |
710 | <td> | |
711 | <p> | |
712 | mode | |
713 | </p> | |
714 | </td> | |
715 | <td> | |
716 | <p> | |
717 | 0 | |
718 | </p> | |
719 | </td> | |
720 | </tr> | |
721 | <tr> | |
722 | <td> | |
723 | <p> | |
724 | skewness | |
725 | </p> | |
726 | </td> | |
727 | <td> | |
728 | <p> | |
729 | (2-p)/√q | |
730 | </p> | |
731 | </td> | |
732 | </tr> | |
733 | <tr> | |
734 | <td> | |
735 | <p> | |
736 | kurtosis | |
737 | </p> | |
738 | </td> | |
739 | <td> | |
740 | <p> | |
741 | 9+p²/q | |
742 | </p> | |
743 | </td> | |
744 | </tr> | |
745 | <tr> | |
746 | <td> | |
747 | <p> | |
748 | kurtosis excess | |
749 | </p> | |
750 | </td> | |
751 | <td> | |
752 | <p> | |
753 | 6 +p²/q | |
754 | </p> | |
755 | </td> | |
756 | </tr> | |
757 | <tr> | |
758 | <td> | |
759 | <p> | |
760 | parameter estimation member functions | |
761 | </p> | |
762 | </td> | |
763 | <td> | |
764 | <p> | |
765 | See <a class="link" href="negative_binomial_dist.html" title="Negative Binomial Distribution">Negative | |
766 | Binomial Distribution</a> | |
767 | </p> | |
768 | </td> | |
769 | </tr> | |
770 | <tr> | |
771 | <td> | |
772 | <p> | |
773 | <code class="computeroutput"><span class="identifier">find_lower_bound_on_p</span></code> | |
774 | </p> | |
775 | </td> | |
776 | <td> | |
777 | <p> | |
778 | See <a class="link" href="negative_binomial_dist.html" title="Negative Binomial Distribution">Negative | |
779 | Binomial Distribution</a> | |
780 | </p> | |
781 | </td> | |
782 | </tr> | |
783 | <tr> | |
784 | <td> | |
785 | <p> | |
786 | <code class="computeroutput"><span class="identifier">find_upper_bound_on_p</span></code> | |
787 | </p> | |
788 | </td> | |
789 | <td> | |
790 | <p> | |
791 | See <a class="link" href="negative_binomial_dist.html" title="Negative Binomial Distribution">Negative | |
792 | Binomial Distribution</a> | |
793 | </p> | |
794 | </td> | |
795 | </tr> | |
796 | <tr> | |
797 | <td> | |
798 | <p> | |
799 | <code class="computeroutput"><span class="identifier">find_minimum_number_of_trials</span></code> | |
800 | </p> | |
801 | </td> | |
802 | <td> | |
803 | <p> | |
804 | See <a class="link" href="negative_binomial_dist.html" title="Negative Binomial Distribution">Negative | |
805 | Binomial Distribution</a> | |
806 | </p> | |
807 | </td> | |
808 | </tr> | |
809 | <tr> | |
810 | <td> | |
811 | <p> | |
812 | <code class="computeroutput"><span class="identifier">find_maximum_number_of_trials</span></code> | |
813 | </p> | |
814 | </td> | |
815 | <td> | |
816 | <p> | |
817 | See <a class="link" href="negative_binomial_dist.html" title="Negative Binomial Distribution">Negative | |
818 | Binomial Distribution</a> | |
819 | </p> | |
820 | </td> | |
821 | </tr> | |
822 | </tbody> | |
823 | </table></div> | |
824 | </div> | |
825 | <table xmlns:rev="http://www.cs.rpi.edu/~gregod/boost/tools/doc/revision" width="100%"><tr> | |
826 | <td align="left"></td> | |
827 | <td align="right"><div class="copyright-footer">Copyright © 2006-2010, 2012-2014 Nikhar Agrawal, | |
828 | Anton Bikineev, Paul A. Bristow, Marco Guazzone, Christopher Kormanyos, Hubert | |
829 | Holin, Bruno Lalande, John Maddock, Jeremy Murphy, Johan Råde, Gautam Sewani, | |
830 | Benjamin Sobotta, Thijs van den Berg, Daryle Walker and Xiaogang Zhang<p> | |
831 | Distributed under the Boost Software License, Version 1.0. (See accompanying | |
832 | file LICENSE_1_0.txt or copy at <a href="http://www.boost.org/LICENSE_1_0.txt" target="_top">http://www.boost.org/LICENSE_1_0.txt</a>) | |
833 | </p> | |
834 | </div></td> | |
835 | </tr></table> | |
836 | <hr> | |
837 | <div class="spirit-nav"> | |
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