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25 <div class="section">
26 <div class="titlepage"><div><div><h4 class="title">
27 <a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist"></a><a class="link" href="inverse_chi_squared_dist.html" title="Inverse Chi Squared Distribution">Inverse
28 Chi Squared Distribution</a>
29 </h4></div></div></div>
30 <pre class="programlisting"><span class="preprocessor">#include</span> <span class="special">&lt;</span><span class="identifier">boost</span><span class="special">/</span><span class="identifier">math</span><span class="special">/</span><span class="identifier">distributions</span><span class="special">/</span><span class="identifier">inverse_chi_squared</span><span class="special">.</span><span class="identifier">hpp</span><span class="special">&gt;</span></pre>
31 <pre class="programlisting"><span class="keyword">namespace</span> <span class="identifier">boost</span><span class="special">{</span> <span class="keyword">namespace</span> <span class="identifier">math</span><span class="special">{</span>
32
33 <span class="keyword">template</span> <span class="special">&lt;</span><span class="keyword">class</span> <span class="identifier">RealType</span> <span class="special">=</span> <span class="keyword">double</span><span class="special">,</span>
34 <span class="keyword">class</span> <a class="link" href="../../../policy.html" title="Chapter&#160;15.&#160;Policies: Controlling Precision, Error Handling etc">Policy</a> <span class="special">=</span> <a class="link" href="../../pol_ref/pol_ref_ref.html" title="Policy Class Reference">policies::policy&lt;&gt;</a> <span class="special">&gt;</span>
35 <span class="keyword">class</span> <span class="identifier">inverse_chi_squared_distribution</span>
36 <span class="special">{</span>
37 <span class="keyword">public</span><span class="special">:</span>
38 <span class="keyword">typedef</span> <span class="identifier">RealType</span> <span class="identifier">value_type</span><span class="special">;</span>
39 <span class="keyword">typedef</span> <span class="identifier">Policy</span> <span class="identifier">policy_type</span><span class="special">;</span>
40
41 <span class="identifier">inverse_chi_squared_distribution</span><span class="special">(</span><span class="identifier">RealType</span> <span class="identifier">df</span> <span class="special">=</span> <span class="number">1</span><span class="special">);</span> <span class="comment">// Not explicitly scaled, default 1/df.</span>
42 <span class="identifier">inverse_chi_squared_distribution</span><span class="special">(</span><span class="identifier">RealType</span> <span class="identifier">df</span><span class="special">,</span> <span class="identifier">RealType</span> <span class="identifier">scale</span> <span class="special">=</span> <span class="number">1</span><span class="special">/</span><span class="identifier">df</span><span class="special">);</span> <span class="comment">// Scaled.</span>
43
44 <span class="identifier">RealType</span> <span class="identifier">degrees_of_freedom</span><span class="special">()</span><span class="keyword">const</span><span class="special">;</span> <span class="comment">// Default 1.</span>
45 <span class="identifier">RealType</span> <span class="identifier">scale</span><span class="special">()</span><span class="keyword">const</span><span class="special">;</span> <span class="comment">// Optional scale [xi] (variance), default 1/degrees_of_freedom.</span>
46 <span class="special">};</span>
47
48 <span class="special">}}</span> <span class="comment">// namespace boost // namespace math</span>
49 </pre>
50 <p>
51 The inverse chi squared distribution is a continuous probability distribution
52 of the <span class="bold"><strong>reciprocal</strong></span> of a variable distributed
53 according to the chi squared distribution.
54 </p>
55 <p>
56 The sources below give confusingly different formulae using different symbols
57 for the distribution pdf, but they are all the same, or related by a change
58 of variable, or choice of scale.
59 </p>
60 <p>
61 Two constructors are available to implement both the scaled and (implicitly)
62 unscaled versions.
63 </p>
64 <p>
65 The main version has an explicit scale parameter which implements the
66 <a href="http://en.wikipedia.org/wiki/Scaled-inverse-chi-square_distribution" target="_top">scaled
67 inverse chi_squared distribution</a>.
68 </p>
69 <p>
70 A second version has an implicit scale = 1/degrees of freedom and gives
71 the 1st definition in the <a href="http://en.wikipedia.org/wiki/Inverse-chi-square_distribution" target="_top">Wikipedia
72 inverse chi_squared distribution</a>. The 2nd Wikipedia inverse chi_squared
73 distribution definition can be implemented by explicitly specifying a scale
74 = 1.
75 </p>
76 <p>
77 Both definitions are also available in Wolfram Mathematica and in <a href="http://www.r-project.org/" target="_top">The R Project for Statistical Computing</a>
78 (geoR) with default scale = 1/degrees of freedom.
79 </p>
80 <p>
81 See
82 </p>
83 <div class="itemizedlist"><ul class="itemizedlist" style="list-style-type: disc; ">
84 <li class="listitem">
85 Inverse chi_squared distribution <a href="http://en.wikipedia.org/wiki/Inverse-chi-square_distribution" target="_top">http://en.wikipedia.org/wiki/Inverse-chi-square_distribution</a>
86 </li>
87 <li class="listitem">
88 Scaled inverse chi_squared distribution<a href="http://en.wikipedia.org/wiki/Scaled-inverse-chi-square_distribution" target="_top">http://en.wikipedia.org/wiki/Scaled-inverse-chi-square_distribution</a>
89 </li>
90 <li class="listitem">
91 R inverse chi_squared distribution functions <a href="http://hosho.ees.hokudai.ac.jp/~kubo/Rdoc/library/geoR/html/InvChisquare.html" target="_top">R
92 </a>
93 </li>
94 <li class="listitem">
95 Inverse chi_squared distribution functions <a href="http://mathworld.wolfram.com/InverseChi-SquaredDistribution.html" target="_top">Weisstein,
96 Eric W. "Inverse Chi-Squared Distribution." From MathWorld--A
97 Wolfram Web Resource.</a>
98 </li>
99 <li class="listitem">
100 Inverse chi_squared distribution reference <a href="http://reference.wolfram.com/mathematica/ref/InverseChiSquareDistribution.html" target="_top">Weisstein,
101 Eric W. "Inverse Chi-Squared Distribution reference." From
102 Wolfram Mathematica.</a>
103 </li>
104 </ul></div>
105 <p>
106 The inverse_chi_squared distribution is used in <a href="http://en.wikipedia.org/wiki/Bayesian_statistics" target="_top">Bayesian
107 statistics</a>: the scaled inverse chi-square is conjugate prior for
108 the normal distribution with known mean, model parameter &#963;&#178; (variance).
109 </p>
110 <p>
111 See <a href="http://en.wikipedia.org/wiki/Conjugate_prior" target="_top">conjugate
112 priors including a table of distributions and their priors.</a>
113 </p>
114 <p>
115 See also <a class="link" href="inverse_gamma_dist.html" title="Inverse Gamma Distribution">Inverse
116 Gamma Distribution</a> and <a class="link" href="chi_squared_dist.html" title="Chi Squared Distribution">Chi
117 Squared Distribution</a>.
118 </p>
119 <p>
120 The inverse_chi_squared distribution is a special case of a inverse_gamma
121 distribution with &#957; (degrees_of_freedom) shape (&#945;) and scale (&#946;) where
122 </p>
123 <p>
124 &#8192;&#8192; &#945;= &#957; /2 and &#946; = &#189;.
125 </p>
126 <div class="note"><table border="0" summary="Note">
127 <tr>
128 <td rowspan="2" align="center" valign="top" width="25"><img alt="[Note]" src="../../../../../../../doc/src/images/note.png"></td>
129 <th align="left">Note</th>
130 </tr>
131 <tr><td align="left" valign="top">
132 <p>
133 This distribution <span class="bold"><strong>does</strong></span> provide the typedef:
134 </p>
135 <pre class="programlisting"><span class="keyword">typedef</span> <span class="identifier">inverse_chi_squared_distribution</span><span class="special">&lt;</span><span class="keyword">double</span><span class="special">&gt;</span> <span class="identifier">inverse_chi_squared</span><span class="special">;</span></pre>
136 <p>
137 If you want a <code class="computeroutput"><span class="keyword">double</span></code> precision
138 inverse_chi_squared distribution you can use
139 </p>
140 <pre class="programlisting"><span class="identifier">boost</span><span class="special">::</span><span class="identifier">math</span><span class="special">::</span><span class="identifier">inverse_chi_squared_distribution</span><span class="special">&lt;&gt;</span></pre>
141 <p>
142 or you can write <code class="computeroutput"><span class="identifier">inverse_chi_squared</span>
143 <span class="identifier">my_invchisqr</span><span class="special">(</span><span class="number">2</span><span class="special">,</span> <span class="number">3</span><span class="special">);</span></code>
144 </p>
145 </td></tr>
146 </table></div>
147 <p>
148 For degrees of freedom parameter &#957;, the (<span class="bold"><strong>unscaled</strong></span>)
149 inverse chi_squared distribution is defined by the probability density
150 function (PDF):
151 </p>
152 <p>
153 &#8192;&#8192; f(x;&#957;) = 2<sup>-&#957;/2</sup> x<sup>-&#957;/2-1</sup> e<sup>-1/2x</sup> / &#915;(&#957;/2)
154 </p>
155 <p>
156 and Cumulative Density Function (CDF)
157 </p>
158 <p>
159 &#8192;&#8192; F(x;&#957;) = &#915;(&#957;/2, 1/2x) / &#915;(&#957;/2)
160 </p>
161 <p>
162 For degrees of freedom parameter &#957; and scale parameter &#958;, the <span class="bold"><strong>scaled</strong></span>
163 inverse chi_squared distribution is defined by the probability density
164 function (PDF):
165 </p>
166 <p>
167 &#8192;&#8192; f(x;&#957;, &#958;) = (&#958;&#957;/2)<sup>&#957;/2</sup> e<sup>-&#957;&#958;/2x</sup> x<sup>-1-&#957;/2</sup> / &#915;(&#957;/2)
168 </p>
169 <p>
170 and Cumulative Density Function (CDF)
171 </p>
172 <p>
173 &#8192;&#8192; F(x;&#957;, &#958;) = &#915;(&#957;/2, &#957;&#958;/2x) / &#915;(&#957;/2)
174 </p>
175 <p>
176 The following graphs illustrate how the PDF and CDF of the inverse chi_squared
177 distribution varies for a few values of parameters &#957; and &#958;:
178 </p>
179 <p>
180 <span class="inlinemediaobject"><img src="../../../../graphs/inverse_chi_squared_pdf.svg" align="middle"></span>
181 </p>
182 <p>
183 <span class="inlinemediaobject"><img src="../../../../graphs/inverse_chi_squared_cdf.svg" align="middle"></span>
184 </p>
185 <h5>
186 <a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.h0"></a>
187 <span class="phrase"><a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.member_functions"></a></span><a class="link" href="inverse_chi_squared_dist.html#math_toolkit.dist_ref.dists.inverse_chi_squared_dist.member_functions">Member
188 Functions</a>
189 </h5>
190 <pre class="programlisting"><span class="identifier">inverse_chi_squared_distribution</span><span class="special">(</span><span class="identifier">RealType</span> <span class="identifier">df</span> <span class="special">=</span> <span class="number">1</span><span class="special">);</span> <span class="comment">// Implicitly scaled 1/df.</span>
191 <span class="identifier">inverse_chi_squared_distribution</span><span class="special">(</span><span class="identifier">RealType</span> <span class="identifier">df</span> <span class="special">=</span> <span class="number">1</span><span class="special">,</span> <span class="identifier">RealType</span> <span class="identifier">scale</span><span class="special">);</span> <span class="comment">// Explicitly scaled.</span>
192 </pre>
193 <p>
194 Constructs an inverse chi_squared distribution with &#957; degrees of freedom
195 <span class="emphasis"><em>df</em></span>, and scale <span class="emphasis"><em>scale</em></span> with default
196 value 1/df.
197 </p>
198 <p>
199 Requires that the degrees of freedom &#957; parameter is greater than zero, otherwise
200 calls <a class="link" href="../../error_handling.html#math_toolkit.error_handling.domain_error">domain_error</a>.
201 </p>
202 <pre class="programlisting"><span class="identifier">RealType</span> <span class="identifier">degrees_of_freedom</span><span class="special">()</span><span class="keyword">const</span><span class="special">;</span>
203 </pre>
204 <p>
205 Returns the degrees_of_freedom &#957; parameter of this distribution.
206 </p>
207 <pre class="programlisting"><span class="identifier">RealType</span> <span class="identifier">scale</span><span class="special">()</span><span class="keyword">const</span><span class="special">;</span>
208 </pre>
209 <p>
210 Returns the scale &#958; parameter of this distribution.
211 </p>
212 <h5>
213 <a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.h1"></a>
214 <span class="phrase"><a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.non_member_accessors"></a></span><a class="link" href="inverse_chi_squared_dist.html#math_toolkit.dist_ref.dists.inverse_chi_squared_dist.non_member_accessors">Non-member
215 Accessors</a>
216 </h5>
217 <p>
218 All the <a class="link" href="../nmp.html" title="Non-Member Properties">usual non-member accessor
219 functions</a> that are generic to all distributions are supported:
220 <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.cdf">Cumulative Distribution Function</a>,
221 <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.pdf">Probability Density Function</a>,
222 <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.quantile">Quantile</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.hazard">Hazard Function</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.chf">Cumulative Hazard Function</a>,
223 <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.mean">mean</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.median">median</a>,
224 <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.mode">mode</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.variance">variance</a>,
225 <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.sd">standard deviation</a>,
226 <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.skewness">skewness</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.kurtosis">kurtosis</a>, <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.kurtosis_excess">kurtosis_excess</a>,
227 <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.range">range</a> and <a class="link" href="../nmp.html#math_toolkit.dist_ref.nmp.support">support</a>.
228 </p>
229 <p>
230 The domain of the random variate is [0,+&#8734;].
231 </p>
232 <div class="note"><table border="0" summary="Note">
233 <tr>
234 <td rowspan="2" align="center" valign="top" width="25"><img alt="[Note]" src="../../../../../../../doc/src/images/note.png"></td>
235 <th align="left">Note</th>
236 </tr>
237 <tr><td align="left" valign="top"><p>
238 Unlike some definitions, this implementation supports a random variate
239 equal to zero as a special case, returning zero for both pdf and cdf.
240 </p></td></tr>
241 </table></div>
242 <h5>
243 <a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.h2"></a>
244 <span class="phrase"><a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.accuracy"></a></span><a class="link" href="inverse_chi_squared_dist.html#math_toolkit.dist_ref.dists.inverse_chi_squared_dist.accuracy">Accuracy</a>
245 </h5>
246 <p>
247 The inverse gamma distribution is implemented in terms of the incomplete
248 gamma functions like the <a class="link" href="inverse_gamma_dist.html" title="Inverse Gamma Distribution">Inverse
249 Gamma Distribution</a> that use <a class="link" href="../../sf_gamma/igamma.html" title="Incomplete Gamma Functions">gamma_p</a>
250 and <a class="link" href="../../sf_gamma/igamma.html" title="Incomplete Gamma Functions">gamma_q</a> and their
251 inverses <a class="link" href="../../sf_gamma/igamma_inv.html" title="Incomplete Gamma Function Inverses">gamma_p_inv</a>
252 and <a class="link" href="../../sf_gamma/igamma_inv.html" title="Incomplete Gamma Function Inverses">gamma_q_inv</a>:
253 refer to the accuracy data for those functions for more information. But
254 in general, gamma (and thus inverse gamma) results are often accurate to
255 a few epsilon, &gt;14 decimal digits accuracy for 64-bit double. unless
256 iteration is involved, as for the estimation of degrees of freedom.
257 </p>
258 <h5>
259 <a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.h3"></a>
260 <span class="phrase"><a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.implementation"></a></span><a class="link" href="inverse_chi_squared_dist.html#math_toolkit.dist_ref.dists.inverse_chi_squared_dist.implementation">Implementation</a>
261 </h5>
262 <p>
263 In the following table &#957; is the degrees of freedom parameter and &#958; is the scale
264 parameter of the distribution, <span class="emphasis"><em>x</em></span> is the random variate,
265 <span class="emphasis"><em>p</em></span> is the probability and <span class="emphasis"><em>q = 1-p</em></span>
266 its complement. Parameters &#945; for shape and &#946; for scale are used for the inverse
267 gamma function: &#945; = &#957;/2 and &#946; = &#957; * &#958;/2.
268 </p>
269 <div class="informaltable"><table class="table">
270 <colgroup>
271 <col>
272 <col>
273 </colgroup>
274 <thead><tr>
275 <th>
276 <p>
277 Function
278 </p>
279 </th>
280 <th>
281 <p>
282 Implementation Notes
283 </p>
284 </th>
285 </tr></thead>
286 <tbody>
287 <tr>
288 <td>
289 <p>
290 pdf
291 </p>
292 </td>
293 <td>
294 <p>
295 Using the relation: pdf = <a class="link" href="../../sf_gamma/gamma_derivatives.html" title="Derivative of the Incomplete Gamma Function">gamma_p_derivative</a>(&#945;,
296 &#946;/ x, &#946;) / x * x
297 </p>
298 </td>
299 </tr>
300 <tr>
301 <td>
302 <p>
303 cdf
304 </p>
305 </td>
306 <td>
307 <p>
308 Using the relation: p = <a class="link" href="../../sf_gamma/igamma.html" title="Incomplete Gamma Functions">gamma_q</a>(&#945;,
309 &#946; / x)
310 </p>
311 </td>
312 </tr>
313 <tr>
314 <td>
315 <p>
316 cdf complement
317 </p>
318 </td>
319 <td>
320 <p>
321 Using the relation: q = <a class="link" href="../../sf_gamma/igamma.html" title="Incomplete Gamma Functions">gamma_p</a>(&#945;,
322 &#946; / x)
323 </p>
324 </td>
325 </tr>
326 <tr>
327 <td>
328 <p>
329 quantile
330 </p>
331 </td>
332 <td>
333 <p>
334 Using the relation: x = &#946; &#160;/ <a class="link" href="../../sf_gamma/igamma_inv.html" title="Incomplete Gamma Function Inverses">gamma_q_inv</a>(&#945;,
335 p)
336 </p>
337 </td>
338 </tr>
339 <tr>
340 <td>
341 <p>
342 quantile from the complement
343 </p>
344 </td>
345 <td>
346 <p>
347 Using the relation: x = &#945; &#160;/ <a class="link" href="../../sf_gamma/igamma_inv.html" title="Incomplete Gamma Function Inverses">gamma_p_inv</a>(&#945;,
348 q)
349 </p>
350 </td>
351 </tr>
352 <tr>
353 <td>
354 <p>
355 mode
356 </p>
357 </td>
358 <td>
359 <p>
360 &#957; * &#958; / (&#957; + 2)
361 </p>
362 </td>
363 </tr>
364 <tr>
365 <td>
366 <p>
367 median
368 </p>
369 </td>
370 <td>
371 <p>
372 no closed form analytic equation is known, but is evaluated as
373 quantile(0.5)
374 </p>
375 </td>
376 </tr>
377 <tr>
378 <td>
379 <p>
380 mean
381 </p>
382 </td>
383 <td>
384 <p>
385 &#957;&#958; / (&#957; - 2) for &#957; &gt; 2, else a <a class="link" href="../../error_handling.html#math_toolkit.error_handling.domain_error">domain_error</a>
386 </p>
387 </td>
388 </tr>
389 <tr>
390 <td>
391 <p>
392 variance
393 </p>
394 </td>
395 <td>
396 <p>
397 2 &#957;&#178; &#958;&#178; / ((&#957; -2)&#178; (&#957; -4)) for &#957; &gt;4, else a <a class="link" href="../../error_handling.html#math_toolkit.error_handling.domain_error">domain_error</a>
398 </p>
399 </td>
400 </tr>
401 <tr>
402 <td>
403 <p>
404 skewness
405 </p>
406 </td>
407 <td>
408 <p>
409 4 &#8730;2 &#8730;(&#957;-4) /(&#957;-6) for &#957; &gt;6, else a <a class="link" href="../../error_handling.html#math_toolkit.error_handling.domain_error">domain_error</a>
410 </p>
411 </td>
412 </tr>
413 <tr>
414 <td>
415 <p>
416 kurtosis_excess
417 </p>
418 </td>
419 <td>
420 <p>
421 12 * (5&#957; - 22) / ((&#957; - 6) * (&#957; - 8)) for &#957; &gt;8, else a <a class="link" href="../../error_handling.html#math_toolkit.error_handling.domain_error">domain_error</a>
422 </p>
423 </td>
424 </tr>
425 <tr>
426 <td>
427 <p>
428 kurtosis
429 </p>
430 </td>
431 <td>
432 <p>
433 3 + 12 * (5&#957; - 22) / ((&#957; - 6) * (&#957;-8)) for &#957; &gt;8, else a <a class="link" href="../../error_handling.html#math_toolkit.error_handling.domain_error">domain_error</a>
434 </p>
435 </td>
436 </tr>
437 </tbody>
438 </table></div>
439 <h5>
440 <a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.h4"></a>
441 <span class="phrase"><a name="math_toolkit.dist_ref.dists.inverse_chi_squared_dist.references"></a></span><a class="link" href="inverse_chi_squared_dist.html#math_toolkit.dist_ref.dists.inverse_chi_squared_dist.references">References</a>
442 </h5>
443 <div class="orderedlist"><ol class="orderedlist" type="1">
444 <li class="listitem">
445 Bayesian Data Analysis, Andrew Gelman, John B. Carlin, Hal S. Stern,
446 Donald B. Rubin, ISBN-13: 978-1584883883, Chapman &amp; Hall; 2 edition
447 (29 July 2003).
448 </li>
449 <li class="listitem">
450 Bayesian Computation with R, Jim Albert, ISBN-13: 978-0387922973, Springer;
451 2nd ed. edition (10 Jun 2009)
452 </li>
453 </ol></div>
454 </div>
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457 <td align="right"><div class="copyright-footer">Copyright &#169; 2006-2010, 2012-2014 Nikhar Agrawal,
458 Anton Bikineev, Paul A. Bristow, Marco Guazzone, Christopher Kormanyos, Hubert
459 Holin, Bruno Lalande, John Maddock, Jeremy Murphy, Johan R&#229;de, Gautam Sewani,
460 Benjamin Sobotta, Thijs van den Berg, Daryle Walker and Xiaogang Zhang<p>
461 Distributed under the Boost Software License, Version 1.0. (See accompanying
462 file LICENSE_1_0.txt or copy at <a href="http://www.boost.org/LICENSE_1_0.txt" target="_top">http://www.boost.org/LICENSE_1_0.txt</a>)
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